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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs67040724 chr6:27905509 T/C ZFP57 chr6:29640169-29648887:- 0.94 8.94 8.25E-18 Box Plot
THCA rs6704727 chr2:101053827 A/T LOC285359 chr3:101431278-101432259:+ 0.35 6.53 1.71E-10 Box Plot
THCA rs6705031 chr2:132262031 G/T CCDC74B chr2:130896860-130902707:- 0.35 6.98 9.63E-12 Box Plot
THCA rs6705682 chr2:101198221 C/T LOC285359 chr3:101431278-101432259:+ 0.36 7.02 7.53E-12 Box Plot
THCA rs6705836 chr2:132254393 C/T CCDC74B chr2:130896860-130902707:- 0.39 6.87 1.98E-11 Box Plot
THCA rs6707618 chr2:113243799 A/T RGPD5 chr2:110550335-110615272:+ -0.49 -7.42 5.33E-13 Box Plot
THCA rs6707948 chr2:101093042 C/T LOC285359 chr3:101431278-101432259:+ 0.36 6.91 1.51E-11 Box Plot
THCA rs6708613 chr2:101081071 A/G LOC285359 chr3:101431278-101432259:+ -0.35 -6.77 3.91E-11 Box Plot
THCA rs6708841 chr2:113253685 C/T RGPD5 chr2:110550335-110615272:+ -0.49 -6.93 1.34E-11 Box Plot
THCA rs6708927 chr2:113244960 A/G RGPD5 chr2:110550335-110615272:+ -0.52 -7.68 8.86E-14 Box Plot
THCA rs67092078 chr6:27054772 G/A RNF5P1 chr8:38458179-38458718:- 0.79 6.87 2.05E-11 Box Plot
THCA rs67092078 chr6:27054772 G/A ZFP57 chr6:29640169-29648887:- 0.81 7.33 1.02E-12 Box Plot
THCA rs6709245 chr2:132248876 A/G CCDC74B chr2:130896860-130902707:- 0.37 7.32 1.07E-12 Box Plot
THCA rs67101035 chr6:27798887 C/G BTN3A2 chr6:26365387-26378548:+ -0.88 -12.43 6.22E-31 Box Plot
THCA rs67101035 chr6:27798887 C/G RNF5P1 chr8:38458179-38458718:- 0.7 6.08 2.43E-9 Box Plot